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DNA-binding specificity of the Lon protease alpha-domain from Brevibacillus thermoruber WR-249

  作者 Lin, YC; Lee, HC; Wang, I; Hsu, CH; Liao, JH; Lee, AYL; Chen, CP; Wu, SH  
  选自 期刊  Biochemical and Biophysical Research Communications;  卷期  2009年388-1;  页码  62-66  
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[摘要]Lon protease has been well studied in many aspects; however, the DNA-binding specificity of Lon in prokaryotes has not been clearly identified. Here we examined the DNA-binding activity of Lon protease alpha-domains from Brevibacillus thermoruber (Bt), Bacillus subtilis (Bs), and Escherichia coli (Ec). MALDI-TOF mass spectroscopy showed that the alpha-domain from Bt-Lon binds to the duplex nucleotide sequence 5'-CTGTTAGCGGGC-3' (ms1) and protected it from DNase I digestion. Surface plasmon resonance showed that the Bt-Lon alpha-domain binds with ms1 double-stranded DNA tighter than Bs- and Ec-Lon alpha-domains, whereas the Bt-Lon alpha-domain has dramatically lower affinity for double-stranded DNA with 0 and 50% identity to the ms1 binding sequence. Our results indicated that Bt-Lon alpha-domain plays a critical role with ms1 sequence in the DNA-binding specificity. (C) 2009 Elsevier Inc. All rights reserved.

 
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