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Unnatural Amino Acid Side Chains as S1, S1 ', and S2 ' Probes Yield Cationic Antimicrobial Peptides with Stability toward Chymotryptic Degradation

  作者 KARSTAD RASMUS; ISAKSEN GEIR; BRANDSDAL BJORNOLAV; SVENDSEN JOHN SIGURD; SVENSON JOHAN  
  选自 期刊  Journal of Medicinal Chemistry;  卷期  2010年53-15;  页码  5558-5566  
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[摘要]This work describes how the systematic incorporation of a range of unnatural amino acid derivatives in the PI, P1', and P2' positions allows for the generation of short lactoferricin based cationic antimicrobial peptides with a stability toward chymotryptic degradation. The necessary pharmacophore sets the peptides up for degradation by chymotrypsin, and a heavily truncated native tripeptide was rapidly digested despite its short sequence. Degradation studies indicated that increased half-lives could be obtained by altering the binding to each subsite surrounding the active site without sacrificing the antimicrobial activity. Important structural and mechanistic features were revealed in a fashion not feasible through the use of native peptide substrates. The results, which are generally applicable to a range of relevant peptides, further show that not only the S I pocket, but also to the notably less studied S1' site can be used to control the proteolytic stability by incorporating different analogues of tryptophan and arginine.

 
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