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Selection of a DNA aptamer that binds 8-OHdG using GMP-agarose

  作者 Miyachi, Y; Shimizu, N; Ogino, C; Fukuda, H; Kondo, A  
  选自 期刊  Bioorganic & Medicinal Chemistry Letters;  卷期  2009年19-13;  页码  3619-3622  
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[摘要]DNA aptamers, which bind specific molecule, such as 8-OHdG, with high affinity were investigated using an in vitro selection strategy called systematic evolution of ligands by exponential enrichment (SELEX). However, 8-OHdG was difficult to immobilize on a carrier for SELEX. Therefore, a DNA aptamer binding to 8-OHdG was selected using GMP-agarose as an analogue from a library of about 4(60) random ssDNA sources. As a result, three aptamer candidates were selected. Among the selected DNA aptamers, the No. 22 DNA aptamer exhibited a high affinity for 8-OHdG. The dissociation constant, K-D, of No. 22 DNA aptamer was on the order of 0.1 mu mol/L. This result suggests that using an analogue will be a useful new SELEX method for obtaining various aptamers that are difficult to immobilize on a matrix. (C) 2009 Elsevier Ltd. All rights reserved.

 
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