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The Spermine-Bisaryl Conjugate as a Potent Inducer of B- to Z-DNA Transition

  作者 DOI ISSEI; TSUJI GENICHIRO; KAWAKAMI KYOKO; NAKAGAWA OSAMU; TANIGUCHI YOSUKE; SASAKI SHIGEKI  
  选自 期刊  Chemistry-A European Journal;  卷期  2010年16-39;  页码  11993-11999  
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[摘要]DNA containing alternating purine and pyrimidine repeats has the potential to adopt the Z-DNA structure, one of the well-studied structures besides A- and B-DNA. Despite a number of molecular models that have been proposed to explain the mechanism for B -> Z transition, there is continued discussion on the mechanism and physiological role of this transition. In this study, we have found that the bis(2-naphthyl)-maleimide-spermine conjugate (3c) exhibits a remarkable ability to cause the B -> Z, transition of d(CGCGCG)(2) at low salt concentrations. Using isothermal titration calorimetry (ITC) we show that the B -> Z transition induced by 3c is both enthalpically and entropically favorable. The ligand might effect the dehydration of B-DNA, which leads to the B -> Z transition. Interestingly, an intermediate CD between the B and Z forms was observed in the pH-dependent transition in the presence of the ligand. The unique structure and characteristics of the ligand designed in this investigation will be useful for the study of Z-DNA.

 
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