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Recognition of Human Tumor Necrosis Factor alpha (TNF-alpha) by Therapeutic Antibody Fragment ENERGETICS AND STRUCTURAL FEATURES

  作者 Marusic, J; Podlipnik, C; Jevsevar, S; Kuzman, D; Vesnaver, G; Lah, J  
  选自 期刊  Journal of Biological Chemistry;  卷期  2012年287-11;  页码  8613-8620  
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[摘要]Human tumor necrosis factor alpha (TNF-alpha) exists in its functional state as a homotrimeric protein and is involved in inflammation processes and immune response of a human organism. Overproduction of TNF-alpha results in the development of chronic autoimmune diseases that can be successfully treated by inhibitors such as monoclonal antibodies. However, the nature of antibody-TNF-alpha recognition remains elusive due to insufficient understanding of its molecular driving forces. Therefore, we studied the energetics of binding of a therapeutic antibody fragment (Fab) to the native and non-native forms of TNF-alpha by employing calorimetric and spectroscopic methods. Global thermodynamic analysis of data obtained from the corresponding binding and urea-induced denaturation experiments has been supported by structural modeling. We demonstrate that the observed high affinity binding of Fab to TNF-alpha is an enthalpy-driven process due mainly to specific noncovalent interactions taking place at the TNF-alpha-Fab binding interface. It is coupled to entropically unfavorable conformational changes and accompanied by entropically favorable solvation contributions. Moreover, the three-state model analysis of TNF-alpha unfolding shows that at physiological concentrations, TNF-alpha may exist not only as a biologically active trimer but also as an inactive monomer. It further suggests that even small changes of TNF-alpha concentration could have a considerable effect on the TNF-alpha activity. We believe that this study sets the energetic basis for understanding of TNF-alpha inhibition by antibodies and its unfolding linked with the concentration-dependent activity regulation.

 
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