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文章名     作者     期刊名     摘要     卷     期         如果没有找到您所需要的文献，请点击 ——此处申请     共24条记录   Electric charge divergence in proteins: insights into the evolution of their three-dimensional properties [作者：Sato, Y; Nishida, M,期刊：Gene, 页码：3-11 , 文章类型： Article，,卷期：2009年441-1-2] Previous studies of protein evolution have identified important mutations in various proteins that affect a small number of residues, but dramatically alter protein function. However, the evolutionary process underlying ... Effect of taxon sampling on recovering the phylogeny of squamate reptiles based on complete mitochondrial genome and nuclear gene sequence data [作者：Albert, EM; Mauro, DS; Garcia-Paris, M; Ruber, L; Zardoya, R,期刊：Gene, 页码：12-21 , 文章类型： Article，,卷期：2009年441-1-2] The complete nucleotide sequences of the mitochondrial (mt) genomes of three species of squamate lizards: Blanus cinereus (Amphisbaenidae), Anguis fragilis (Anguidae), and Tarentola mauritanica (Geckkonidae) were determi... Eukaryotic origin of glyceraldehyde-3-phosphate dehydrogenase genes in Clostridium thermocellum and Clostridium cellulolyticum genomes and putative fates of the exogenous gene in the subsequent genome evolution [作者：Takishita, K; Inagaki, Y,期刊：Gene, 页码：22-27 , 文章类型： Article，,卷期：2009年441-1-2] Although lateral gene transfer (LGT) events have been frequently documented in the evolution of glyceraldehyde-3-phosphate dehydrogenase (GAPDH), no eukaryote-to-prokaryote transfer has been reported so far. Here we desc... Mitogenomic perspectives into iguanid phylogeny and biogeography: Gondwanan vicariance for the origin of Madagascan oplurines [作者：Okajima, Y; Kumazawa, Y,期刊：Gene, 页码：28-35 , 文章类型： Article，,卷期：2009年441-1-2] Complete or nearly complete nucleotide sequences of mitochondrial genomes (mtDNAs) were determined from eight species which, together with previous mtDNA data for two other taxa, cover most subfamilies of Iguanidae sensu... Duplication and adaptive evolution of the COR15 genes within the highly cold-tolerant Draba lineage (Brassicaceae) [作者：Zhou, DW; Zhou, J; Meng, LH; Wang, QB; Xie, H; Guan, YC; Ma, ZY; Zhong, Y; Chen, F; Liu, JQ,期刊：Gene, 页码：36-44 , 文章类型： Article，,卷期：2009年441-1-2] Plants have evolved diverse adaptive mechanisms that enable them to tolerate abiotic stresses, to varying degrees, and such stresses may have strongly influenced evolutionary changes at levels ranging from molecular to m... Estimates of natural selection due to protein tertiary structure inform the ancestry of biallelic loci [作者：Choi, SC; Stone, EA; Kishino, H; Thorne, JL,期刊：Gene, 页码：45-52 , 文章类型： Article，,卷期：2009年441-1-2] We consider the inference of which of two alleles is ancestral when the alleles have a single nonsynonymous difference and when natural selection acts via protein tertiary structure. Whereas the probability that an allel... Population structure of two closely related pelagic cichlids in Lake Victoria, Haplochromis pyrrhocephalus and H. laparogramma [作者：Maeda, K; Takeda, M; Kamiya, K; Aibara, M; Mzighani, SI; Nishida, M; Mizoiri, S; Sato, T; Terai, Y; Okada, N; Tachida, H,期刊：Gene, 页码：67-73 , 文章类型： Article，,卷期：2009年441-1-2] Cichlid fishes in Lake Victoria show spectacular diversification that is thought to be recent. Therefore, by investigating those fishes, we may be able to elucidate recently completed or ongoing speciation processes. We ... Screening the V2R-type putative odorant receptor gene repertoire in bitterling Tanakia lanceolata [作者：Hashiguchi, Y; Nishida, M,期刊：Gene, 页码：74-79 , 文章类型： Article，,卷期：2009年441-1-2] Fish odorant receptors comprise several distinct families of G protein-coupled receptors. The repertoires of fish vomeronasal receptor family 2 (V2R) genes differ substantially among species, which seems to be related to... Molecular systematics and evolution of the recently discovered "Parnassian" butterfly (Parnassius davydovi Churkin, 2006) and its allied species (Lepidoptera, Papilionidae) [作者：Omoto, K; Yonezawa, T; Shinkawa, T,期刊：Gene, 页码：80-88 , 文章类型： Article，,卷期：2009年441-1-2] The nucleotide sequence of 807 bp of the mtDNA-ND5 locus of Parnassius davydovi (Churkin, S. 2006. A new species of Parnassius Latreille, 1804, from Kyrgyzstan (Lepidoptera, Papilionidae). Helios (Moskow) 7,142158), was ... The monophyletic origin of sea lions and fur seals (Carnivora; Otariidae) in the Southern Hemisphere [作者：Yonezawa, T; Kohno, N; Hasegawa, M,期刊：Gene, 页码：89-99 , 文章类型： Article，,卷期：2009年441-1-2] The pinniped family Otariidae (sea lions and fur seals) is composed of 7 extant genera with 14 species. They are mainly distributed in the Southern Hemisphere, but the fossil record is only known from the Northern Hemisp... Characterization and evolutionary landscape of AmnSINE1 in Amniota genomes [作者：Hirakawa, M; Nishihara, H; Kanehisa, M; Okada, N,期刊：Gene, 页码：100-110 , 文章类型： Article，,卷期：2009年441-1-2] Discovery of a large number of conserved non-coding elements (CNEs) in vertebrate genomes provides a cornerstone to elucidate molecular mechanisms of macroevolution. Extensive comparative genomics has proven that transpo... The evolution of two partner LINE/SINE families and a full-length chromodomain-containing Ty3/Gypsy LTR element in the first reptilian genome of Anolis carolinensis [作者：Piskurek, O; Nishihara, H; Okada, N,期刊：Gene, 页码：111-118 , 文章类型： Article，,卷期：2009年441-1-2] Transposable elements have been characterized in a number of vertebrates, including whole genomes of mammals, birds, and fishes. The Anolis carolinensis draft assembly provides the first opportunity to study retroposons ... A likelihood look at the supermatrix-supertree controversy [作者：Ren, FR; Tanaka, H; Yang, ZH,期刊：Gene, 页码：119-125 , 文章类型： Article，,卷期：2009年441-1-2] Supermatrix and supertree methods are two strategies advocated for phylogenetic analysis of sequence data from multiple gene loci, especially when some species are missing at some loci. The supermatrix method concatenate... Tracing back EFL gene evolution in the cryptomonads-haptophytes assemblage: Separate origins of EFL genes in haptophytes, photosynthetic cryptomonads, and goniomonads [作者：Sakaguchi, M; Takishita, K; Matsumoto, T; Hashimoto, T; Inagaki, Y,期刊：Gene, 页码：126-131 , 文章类型： Article，,卷期：2009年441-1-2] A recently identified GTPase, elongation factor-like (EFL) protein is proposed to bear the principal functions of translation elongation factor 1 alpha (EF-1 alpha). Pioneering studies of EF-1 alpha/EFL evolution have re... Branch-length estimation bias misleads molecular dating for a vertebrate mitochondrial phylogeny [作者：Phillips, MJ,期刊：Gene, 页码：132-140 , 文章类型： Article，,卷期：2009年441-1-2] Despite recent methodological advances in inferring the time-scale of biological evolution from molecular data, the fundamental question of whether our substitution models are sufficiently well specified to accurately es... Characterization of pairwise and multiple sequence alignment errors [作者：Landan, G; Graur, D,期刊：Gene, 页码：141-147 , 文章类型： Article，,卷期：2009年441-1-2] We characterize pairwise and multiple sequence alignment (MSA) errors by comparing true alignments from simulations of sequence evolution with reconstructed alignments. The vast majority of reconstructed alignments conta...