- Classification and nomenclature of endogenous retroviral sequences (ERVs): Problems and recommendations
[作者:Blomberg, J; Benachenhou, F; Blikstad, V; Sperber, G; Mayer, J,期刊:Gene, 页码:115-123 , 文章类型: Review,,卷期:2009年448-2]
- The genomes of many species are crowded with repetitive mobile sequences. In the case of endogenous retroviruses (ERVs) there is, for various reasons, considerable confusion regarding names assigned to families/groups of...
- The phylogeny of orthoretroviral long terminal repeats (LTRs)
[作者:Benachenhou, F; Blikstad, V; Blomberg, J,期刊:Gene, 页码:134-138 , 文章类型: Article,,卷期:2009年448-2]
- LTRs are sequence elements in retroviruses and retrotransposons which are difficult to align due to their variability. One way of handling such cases is to use Hidden Markov Models (HMMs). In this work HMMs of LTRs were ...
- Ancient repeat sequence derived from U6 snRNA in primate genomes
[作者:Hasnaoui, M; Doucet, AJ; Meziane, O; Gilbert, N,期刊:Gene, 页码:139-144 , 文章类型: Article,,卷期:2009年448-2]
- LINE-1 (L1) is the most represented sequence of the human genome (17% of the total genomic mass). Moreover, it has been proposed for many years and demonstrated more recently that L1 has contributed to the mobilization o...
- Loss of epigenetic silencing in tumors preferentially affects primate-specific retroelements
[作者:Szpakowski, S; Sun, XG; Lage, JM; Dyer, A; Rubinstein, J; Kowalski, D; Sasaki, C; Costa, J; Lizardi, PM,期刊:Gene, 页码:151-167 , 文章类型: Article,,卷期:2009年448-2]
- Close to 50% of the human genome harbors repetitive sequences originally derived from mobile DNA elements, and in normal cells, this sequence compartment is tightly regulated by epigenetic silencing mechanisms involving ...
- Molecular organization of heterochromatin in malaria mosquitoes of the Anopheles maculipennis subgroup
[作者:Grushko, OG; Sharakhova, MV; Stegnii, VN; Sharakhov, IV,期刊:Gene, 页码:192-197 , 文章类型: Article,,卷期:2009年448-2]
- Although heterochromatin makes up a significant portion of the malaria mosquito genome, its organization, function, and evolution are poorly understood. Sibling species of the Anopheles maculipennis subgroup, the Europea...
- Hypervariable 3 ' UTR region of plant LTR-retrotransposons as a source of novel satellite repeats
[作者:Macas, J; Koblizkova, A; Navratilova, A; Neumann, P,期刊:Gene, 页码:198-206 , 文章类型: Article,,卷期:2009年448-2]
- The repetitive sequence PisTR-A has an unusual organization in the pea (Pisum sativum) genome, being present both as short dispersed repeats as well as long arrays of tandemly arranged satellite DNA. Cloning, sequencing ...
- Population dynamics of miniature inverted-repeat transposable elements (MITEs) in Medicago truncatula
[作者:Grzebelus, D; Gladysz, M; Macko-Podgorni, A; Gambin, T; Golis, B; Rakoczy, R; Gambin, A,期刊:Gene, 页码:214-220 , 文章类型: Article,,卷期:2009年448-2]
- Miniature inverted-repeat transposable elements (MITEs) are small and high copy number transposons, related to and mobilized by some class II autonomous elements. New MITE families can be identified by computer-based min...
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